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Fish!


Marine fisheries research

Preview
Most people agree that we should try to conserve our fisheries resources. To do this successfully we need information about the fish living in New Zealand waters. This information is collected by fisheries scientists, and passed on to the Ministry of Fisheries (MFish).

What research is done and how is it used?
Why is research important?
How do scientists research fishstocks?
Aquaculture
Enhancement
photograph of scientist processing data

What research is done and how is it used?
Fish stock research
Exploration research, aquaculture, and enhancement

Fish stock research

Provides information about New Zealand's extensive fish stocks.
Monitors or predicts the impact of fishing and the environment on fish stocks.
This research is used to advise the Government on safe Total Allowable Catch levels for different species.

Exploration research, aquaculture, and enhancement
Exploration, aquaculture and enhancement research is used to help the fishing industry develop new fisheries or exploit different species.
Exploration research: Exploring for new fishing grounds
Aquaculture : Developing techniques for marine farming
Enhancement : Developing techniques for building up "wild" fish stocks, eg, scallops.
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Why is research important?
New Zealand has extensive fisheries in its 200 nautical mile Exclusive Economic Zone. These range from familiar coastal species such as rock lobster, blue cod, snapper and kahawai to more recently developed deepsea fisheries such as orange roughy, hoki and oreos.

We need to know the biology and behaviour of fish, the size and productivity of fish stocks, and their relationship with other species and the environment, so that we can work out sustainable catch levels.

photograph of scientists examining charts Under the Quota Management System, introduced in 1986, catch levels for more than 180 fish stocks are set by the Government. This is done on the basis of information from fisheries scientists with input from the fishing industry, recreational fishers, Maori and environmental groups.
Without adequate research, catch levels may be set too high. The result may be overfishing - taking more fish than the stock can sustain. Once a fishery has been overfished it usually takes a long time and very careful management to rebuild the fish population to a sustainable level. Sometimes a fishery may never recover.
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How do scientists research fish stocks?
Fish populations change in response to being fished, and to changes in their environment. To manage fisheries you don't study a fish stock once and leave it at that. Stocks need to be studied over a long period of time, so that changes can be monitored and catch rates can be altered if necessary. It is a bit like weather forecasting - to predict the future you need some knowledge of the past.

Fish are very difficult to count. Not only do they live up to thousands of metres below the sea's surface, but most move around a lot. Scientists use several research techniques to try and get as good a picture as possible.

Research techniques include:
trawl surveys
acoustic surveys
tagging
underwater filming
egg production
age and growth
catch sampling
biochemistry
catch-effort
modelling
diver counting fish cartoon
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Trawl surveys
Trawl surveys are the bread and butter of fisheries research. Regular surveys are used to estimate changes in the total numbers or weight of fish in an area. They are used for bottom-dwelling fish like orange roughy, hoki, oreo, snapper, and red gurnard.

In a trawl survey, a specified number of trawls are carried out over a particular area. The width of the net's opening, the area of seabed swept by the net and the total survey area are known, so from the catch taken it is possible to estimate the total population in that area.

By carrying out surveys of the area at the same time each year, scientists can track changes in the stocks. Biological details such as the length, weight and sex of the fish in the catch are recorded. Samples such as otoliths (part of the fish's inner ear) are also collected for analysis of age on land.

Problems:
Some fish are unevenly distributed. For example orange roughy live over pinnacles and there may be large areas with no fish and small areas with a high number.
This method assumes that a constant proportion of all fish in the path of the net will go into the net. In fact some escape by going over the top or round the sides. In some cases fish can be 'herded' into the net.
Photograph of the RV Tangaroa
Acoustic surveys
Acoustic surveys aim to estimate the biomass. The technique is mainly used for hoki, orange roughy and southern blue whiting.

Sound waves which are sent out from the research ship strike schools of fish and are reflected back. The energy of the sound waves is measured and it is possible to estimate the biomass.

Problems:
The strength of the signal varies depending on the size of the fish and their orientation, that is, whether a fish has its head up or down or even on a slight angle, and whether the sound signal is from a cluster or a mix of different species.
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Tagging
Tagging is used to work out the movements and age of a range of species, such as snapper, rig, kahawai, school shark and groper.

Fish are caught, their length (and sometimes weight) is recorded, a small tag inserted, and they are returned live to the sea. The tag has a unique serial number and an address for recoveries.

If fishers catch a tagged fish, they are asked to return at least the tag (and usually the fish as well) with details about where and when it was caught. A reward is offered for returned tags.

photograph of scientists tagging fishtagging
Scientists measuring and tagging fish

As scientists know where and when the fish was tagged and where it was caught they can work out its likely movements. Tagging can also be used to estimate growth rates (although tagged fish may not grow at a normal rate because of the presence of the tag).

Stock size can be estimated from the number of fish that were tagged, the number of fish caught by commercial fishers and the proportion of those fish that were tagged. For example if 100 fish were tagged and 10 tags are returned, it is assumed that 10 percent of the stock was caught. If 1000 fish (tagged and untagged) were caught by the fishery, the total population size is estimated to be 10,000 fish.

Problems:
It is difficult to get completely accurate catch figures, some fishers do not return tags, some tags may come out and some tagged fish die as a result of being tagged.
Tagging cannot be used for deepwater species as the fish have to be caught, tagged and released, and deepwater species don't survive the trip to the surface.
Underwater filming
Stereo camera equipment provides three-dimensional images of spawning schools of hoki and orange roughy, taken hundreds of metres below the sea's surface. The aim is to identify fish species and provide information about their size, density and orientation. As a technique it is still in its early stages.

The stereo camera is lowered to depths of up to 1200 metres by a connecting cable, which carries data and a photographic signal back to the vessel.

The video may revolutionise marine photography. It works on the same principle as the stereo camera, with two videos mounted side by side. It provides immediate results, whereas it takes weeks to process photographs from stereo cameras.

Problems:
The lights needed for the video cameras may change the behaviour of the fish, so on occasions still photos are taken instead, using flash lights.
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Egg production
The egg production method is used to estimate the spawning biomass of fish. In New Zealand this method has been used with snapper in the Hauraki Gulf, and more recently orange roughy on the Chatham Rise and on the east coast of the North Island.

When most finfish spawn, eggs are released, fertilised and float to the surface. They are collected in a plankton net. Females are also caught in separate trawls, to assess how many eggs each produces.

A probe is attached to the plankton net, to accurately measure the depth and temperature at which the eggs were collected.

By knowing how many eggs there are in a given area, and knowing the number of eggs produced by the average female, it is possible to estimate the total spawning biomass of the fish under investigation in the area.

Age and growth
Age and growth information is important for scientists trying to predict the impact of fishing on a fish stock.

Some fish, such as flounder, are fast growing, short lived and very productive, so may be able to recover quickly from fishing pressure. Others, such as orange roughy, are slow growing, long lived and not very productive, so may take a long time or never recover.

photograph of scientist removing otolith from fish
Removing the otolith (ear bone)
from a fish

The age of some fish can be worked out by counting the rings on otoliths. (Otoliths are part of the inner ear of the fish and are important for balance and hearing.) They grow in a series of daily rings and seasonal bands or growth zones.

Age determination is used to calculate growth curves for fish in different areas. For example, snapper on the west coast grow faster and mature earlier than snapper in the Hauraki Gulf. It is also useful to estimate the age structure of populations.

When fish are tagged or kept in tanks, the accuracy of ageing from otoliths can be checked by injecting a harmless antibiotic (such as tetracycline) into the fish. This leaves a mark on the otolith which is visible under ultraviolet light, and the growth zones or number of rings outside this mark can be determined.
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Catch sampling
To supplement information gained using other techniques such as trawl surveys and tagging programmes, surveys can be carried out in fish processing factories and on fishing boats, measuring the length and sex of the fish and the size of the catch.

This information, with details of where and when the catch was caught, is used to build up a long-term database, to help monitor changes in the size and age structure of fish stocks.

Biochemical techniques
Genetic fingerprints - the same type used by forensic scientists tracing crime suspects - can reveal important differences between and within fish species. Often they are differences that are only apparent when genetic tags or markers are studied in the lab.

The technique behind much of this work is electrophoresis, where molecules are moved through a gel, which sorts them according to size. Proteins or enzymes which are closely controlled by genes are used for the analysis.

The beauty of this technique is that genetic differences can be studied without time consuming crossbreeding experiments. It is especially important with deepwater species which can't be studied by other techniques, such as tagging, because they don't survive being caught and released.

Another biochemical technique is the study of mitochondrial (mt) DNA, which is passed only through the female line. Because it mutates rapidly, it is a more sensitive population measure than other genetic markers. This has provided scientists with important information on the identification of different stocks of orange roughy. For example, the Puysegur Bank orange roughy stock is genetically distinct from other stocks, although there are no obvious physical differences.

photograph of two scientists working on hoki Scientists are sometimes called upon to use biochemical genetics to help with some detective work on the part of fish consumers. Fish retailers have been known to pass off a cheap species as something more expensive, and this research has been used to identify the species from samples of the suspect fillets.
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Modelling
Modelling is a way of asking computers to answer "what if?" questions about fish populations. To do this, scientists create a fish population model, which is a computer program that describes how populations change over time. The model includes the four main ways in which populations change:
1 Growth
2 Recruitment (birth)
3 Natural mortality (deaths from disease or predation)
4 Fishing mortality (fish caught by fishers)

The first two factors cause populations to increase; while the second two factors cause populations to decrease.

To apply the model to a fish population, information has to be fed into the program. For example, how fast the fish grow, the maximum size of the fish, the age at which the fish become sexually mature, what proportion of the population is likely to die each year from natural causes, and so on.

The sort of questions we want to answer using modelling are:
"if we reduce the annual catch by 20 percent, how much will the population size increase over five years?"
or
"if we increase the minimum size limit on this species, will that make the population more productive (able to sustain higher catches)?"

Catch-effort (catch per unit of effort or CPUE)

Catch-effort values are obtained by dividing the catch (tonnes or kilograms) by a measure of the fishing effort required to catch it.

The effort can be expressed as time (days, hours), fleet size (number of fishing vessels), number of fishing operations (trawl tows, set nets, pot lifts, etc), or size of the fishing gear (vessel, net length, number of hooks, etc).

cartoon of a fish eyeing bait
Changes in CPUE may give an indication of what is happening to the size of the fish stock. In theory, a level trend of CPUE values represents a stable stock, a rising trend an increasing stock and a falling trend a declining stock. A falling trend does not necessarily indicate overfishing; a fish stock will always decline from its initial high level when fishing occurs until it reaches an equilibrium level, when productivity balances the catch being taken.
Problems:

It is difficult to know what factors of the fishing operation are important to measure, and it is difficult to keep up with fishing changes. For example, a boat may install a more powerful motor or change from day to night fishing. This can alter the CPUE without it being any reflection of stock size.

CPUE is not useful for measuring changes in the stock size of fish species which aggregate and are target fished. For example, a pelagic species which schools at the surface can be easily seen from fishing boats or spotter planes and bulk-caught in purse seine nets. School after school may be caught without any change in CPUE, and not until there are few schools left will the CPUE fall.
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Aquaculture
New Zealand, with its extensive coastline and low levels of pollution, is considered ideal for aquaculture. Our aquaculture industry is based on three key species: greenshell mussels, Pacific oysters and chinook salmon. There are other species being farmed but they are smaller contributors to the domestic and export market, for example, freshwater prawns.

Most mussel farming is carried out in the Marlborough Sounds, but there are also farms in the Bay of Plenty, Coromandel, Northland and Stewart Island. The mussels are ongrown from spat (immature mussels) which have been collected from the wild.

photograph of Pacific Oysters
Pacific Oysters
Pacific oysters, farmed in Northland and Coromandel, are also grown from wild spat. This species was introduced to New Zealand accidentally (possibly on the hulls of visiting ships) in the early 1970s, and has replaced the native rock oyster for farming. Recently it has spread to Tasman Bay and parts of the Marlborough Sounds, where oyster farming is developing.

Chinook salmon are reared for ocean ranching from rivers on the east coast of the South Island, and for sea cage rearing in the Marlborough Sounds and at Stewart Island.

Small scale, and at this stage experimental, operations have been set up to farm black-foot paua, rock lobster and grey mullet.

Several other species are being looked at for aquaculture development, but because of their biology, different techniques are needed to raise them. The species include dredge (Bluff) oysters, yellowfoot paua, and marine finfish.

Populations of wild dredge oysters in Foveaux Strait have been devastated by the parasite Bonamia so there is a lot of interest in farming them. The young oysters are relatively easy to grow and scientists have found they grow faster when suspended above the bottom of the sea.

Rock lobsters are not easy to rear from eggs and have a long larval stage. The current emphasis is on collecting larval rock lobster from the sea and growing them in tanks. Scientists have to make sure the rock lobsters have the right conditions, which include temperature, food, tank size, density and shelter.
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Enhancement
Enhancement is a way of boosting stocks by releasing young into the wild. Like aquaculture, it is expensive. It is only practical for high-value species, like rock lobsters, oysters, scallops, paua and snapper, and may, in the main, only be economic for species which feed naturally from the food within the water, as food costs are very high.

Enhancement of scallops has been very successful in Tasman and Golden Bays. Paua enhancement has been tried at the Chatham Islands. In addition there is interest in enhancing snapper in Nelson and the Hauraki Gulf, and dredge oysters in Tasman Bay and Foveaux Strait.

For more information click on any link below.

 

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